A rapid bootstrap algorithm for the RAxML web servers

A Stamatakis, P Hoover, J Rougemont - Systematic biology, 2008 - academic.oup.com
Abstract Despite recent advances achieved by application of high-performance computing
methods and novel algorithmic techniques to maximum likelihood (ML)-based inference
programs, the major computational bottleneck still consists in the computation of bootstrap
support values. Conducting a probably insufficient number of 100 bootstrap (BS) analyses
with current ML programs on large datasets—either with respect to the number of taxa or ...